Carnation DB

Dca15341.1

Annotation

7-exons
f-1
sp|D7SQX9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g01430#unknown#0F0P0C
AT2G38570.1 | Symbols: | CONTAINS InterPro DOMAIN/s: PRC-barrel-like (InterPro:IPR011033); Has 300 Blast hits to 300 proteins in 81 species: Archae - 0; Bacteria - 135; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). | chr2:16136854-16138417 REVERSE LENGTH=328
Repeat List (scaffold174)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15341.1	56	306	306	46.73	251	56	6e-69
Target_name	Start	End	Length	Cov(%)
sp\|D7SQX9_VITVI	122	377	377	67.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15341.1	84	265	306	35.29	182	60	5e-55
Target_name	Start	End	Length	Cov(%)
AT2G38570.1	120	293	328	53.04

seqname	source	feature	start	end	score	strand	frame	group
scaffold174	Augus-PASA	mRNA	232269	236759	.	+	.	ID=Dca15341.1;Parent=Dca15341
scaffold174	Augus-PASA	exon	232269	232607	.	+	.	ID=Dca15341.1.exon1;Parent=Dca15341.1
scaffold174	Augus-PASA	exon	234158	234238	.	+	.	ID=Dca15341.1.exon2;Parent=Dca15341.1
scaffold174	Augus-PASA	exon	234589	234669	.	+	.	ID=Dca15341.1.exon3;Parent=Dca15341.1
scaffold174	Augustus	exon	234789	234833	.	+	.	ID=Dca15341.1.exon4;Parent=Dca15341.1
scaffold174	Augus-PASA	exon	234928	235017	.	+	.	ID=Dca15341.1.exon5;Parent=Dca15341.1
scaffold174	Augus-PASA	exon	235735	235836	.	+	.	ID=Dca15341.1.exon6;Parent=Dca15341.1
scaffold174	Augus-PASA	exon	236577	236759	.	+	.	ID=Dca15341.1.exon7;Parent=Dca15341.1