Dca15357.1
Annotation
- 4-exons
- f-1
- sp|B9GRQ2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_850663#GO:0016020;GO:0003885;GO:0050660;GO:0008762#3F0P1C
- sp|B9S3D0_RICCO#D-lactate dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0732560#GO:0016020;GO:0003885;GO:0050660;GO:0050105;GO:0008762#4F0P1C
- Repeat List (scaffold1741)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15357.1 |
109 |
333 |
349 |
37.24 |
225 |
58 |
1e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GRQ2_POPTR |
1 |
226 |
584 |
38.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15357.1 |
101 |
333 |
349 |
37.82 |
233 |
56 |
8e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G46760.1 |
4 |
239 |
603 |
39.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1741 |
Augustus |
mRNA |
26714 |
34490 |
. |
+ |
. |
ID=Dca15357.1;Parent=Dca15357 |
| scaffold1741 |
Augustus |
exon |
26714 |
26915 |
. |
+ |
. |
ID=Dca15357.1.exon1;Parent=Dca15357.1 |
| scaffold1741 |
Augustus |
exon |
29588 |
29770 |
. |
+ |
. |
ID=Dca15357.1.exon2;Parent=Dca15357.1 |
| scaffold1741 |
Augustus |
exon |
33260 |
33447 |
. |
+ |
. |
ID=Dca15357.1.exon3;Parent=Dca15357.1 |
| scaffold1741 |
Augustus |
exon |
34014 |
34490 |
. |
+ |
. |
ID=Dca15357.1.exon4;Parent=Dca15357.1 |
