Carnation DB

Dca15375.1

Annotation

8-exons
f-1
sp|B9GIH2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_752026#GO:0005509;GO:0004435;GO:0004871;GO:0035556;GO:0006629#3F2P0C
sp|O49952_SOLTU#Phosphoinositide-specific phospholipase C#Solanum tuberosum (Potato)#Name=plc3#GO:0005509;GO:0004435;GO:0004871;GO:0035556;GO:0006629#3F2P0C
Repeat List (scaffold1743)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15375.1	1	547	548	64.41	547	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GIH2_POPTR	15	572	573	97.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15375.1	2	548	548	55.65	547	54	3e-177
Target_name	Start	End	Length	Cov(%)
AT3G08510.1	16	581	581	97.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1743	Augustus	mRNA	25163	27609	.	+	.	ID=Dca15375.1;Parent=Dca15375
scaffold1743	Augustus	exon	25163	25426	.	+	.	ID=Dca15375.1.exon1;Parent=Dca15375.1
scaffold1743	Augustus	exon	25593	25789	.	+	.	ID=Dca15375.1.exon2;Parent=Dca15375.1
scaffold1743	Augustus	exon	25869	26004	.	+	.	ID=Dca15375.1.exon3;Parent=Dca15375.1
scaffold1743	Augustus	exon	26152	26355	.	+	.	ID=Dca15375.1.exon4;Parent=Dca15375.1
scaffold1743	Augustus	exon	26447	26640	.	+	.	ID=Dca15375.1.exon5;Parent=Dca15375.1
scaffold1743	Augustus	exon	26746	26863	.	+	.	ID=Dca15375.1.exon6;Parent=Dca15375.1
scaffold1743	Augustus	exon	26978	27217	.	+	.	ID=Dca15375.1.exon7;Parent=Dca15375.1
scaffold1743	Augustus	exon	27316	27609	.	+	.	ID=Dca15375.1.exon8;Parent=Dca15375.1