Carnation DB

Dca15417.1

Annotation

6-exons
f-1
sp|B9HER0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832235#GO:0005840;GO:0003735;GO:0006412#1F1P1C
AT5G64650.1 | Symbols: | Ribosomal protein L17 family protein | chr5:25839542-25840775 REVERSE LENGTH=160
Repeat List (scaffold1747)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15417.1	1	160	160	82.5	160	83	1e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9HER0_POPTR	1	160	160	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15417.1	1	160	160	78.75	160	79	9e-74
Target_name	Start	End	Length	Cov(%)
AT5G64650.1	1	160	160	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1747	Augustus	mRNA	6180	8425	.	+	.	ID=Dca15417.1;Parent=Dca15417
scaffold1747	Augustus	exon	6180	6235	.	+	.	ID=Dca15417.1.exon1;Parent=Dca15417.1
scaffold1747	Augustus	exon	6354	6408	.	+	.	ID=Dca15417.1.exon2;Parent=Dca15417.1
scaffold1747	Augustus	exon	6531	6581	.	+	.	ID=Dca15417.1.exon3;Parent=Dca15417.1
scaffold1747	Augustus	exon	7825	7916	.	+	.	ID=Dca15417.1.exon4;Parent=Dca15417.1
scaffold1747	Augustus	exon	8011	8088	.	+	.	ID=Dca15417.1.exon5;Parent=Dca15417.1
scaffold1747	Augustus	exon	8275	8425	.	+	.	ID=Dca15417.1.exon6;Parent=Dca15417.1