Carnation DB

Dca15433.1

Annotation

10-exons
f-1
sp|B9H997_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819297#GO:0003824#1F0P0C
AT4G13360.1 | Symbols: | ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr4:7775133-7777701 FORWARD LENGTH=421
Repeat List (scaffold1748)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15433.1	10	385	389	69.92	376	73	3e-164
Target_name	Start	End	Length	Cov(%)
sp\|B9H997_POPTR	2	377	380	98.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15433.1	7	389	389	70.95	383	73	2e-166
Target_name	Start	End	Length	Cov(%)
AT4G13360.1	39	421	421	90.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1748	Augus-PASA	mRNA	51819	56971	.	-	.	ID=Dca15433.1;Parent=Dca15433
scaffold1748	Augus-PASA	exon	51819	51920	.	-	.	ID=Dca15433.1.exon1;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	52310	52411	.	-	.	ID=Dca15433.1.exon2;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	52506	52633	.	-	.	ID=Dca15433.1.exon3;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	52909	53087	.	-	.	ID=Dca15433.1.exon4;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	53374	53503	.	-	.	ID=Dca15433.1.exon5;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	54068	54164	.	-	.	ID=Dca15433.1.exon6;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	54299	54433	.	-	.	ID=Dca15433.1.exon7;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	55199	55263	.	-	.	ID=Dca15433.1.exon8;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	55421	55522	.	-	.	ID=Dca15433.1.exon9;Parent=Dca15433.1
scaffold1748	Augus-PASA	exon	56842	56971	.	-	.	ID=Dca15433.1.exon10;Parent=Dca15433.1