Dca15470.1
Annotation
- 2-exons
- f-1
- sp|B9RCB4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1686550#unknown#0F0P0C
- AT5G41270.1 | Symbols: | CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:16507797-16508813 FORWARD LENGTH=258
- Repeat List (scaffold175)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15470.1 |
1 |
271 |
271 |
47.97 |
271 |
45 |
7e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RCB4_RICCO |
1 |
293 |
293 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15470.1 |
33 |
271 |
271 |
39.11 |
239 |
42 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G41270.1 |
19 |
258 |
258 |
93.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold175 |
Augus-PASA |
mRNA |
133939 |
136058 |
. |
- |
. |
ID=Dca15470.1;Parent=Dca15470 |
| scaffold175 |
Augus-PASA |
exon |
133939 |
134494 |
. |
- |
. |
ID=Dca15470.1.exon1;Parent=Dca15470.1 |
| scaffold175 |
Augus-PASA |
exon |
135799 |
136058 |
. |
- |
. |
ID=Dca15470.1.exon2;Parent=Dca15470.1 |
