Carnation DB

Dca15475.1

Annotation

12-exons
f-1
sp|B9MUP4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796290#GO:0048208#0F1P0C
AT5G47490.1 | Symbols: | RGPR-related | chr5:19264675-19270487 FORWARD LENGTH=1361
Repeat List (scaffold175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15475.1	9	1328	1328	50.3	1320	47	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MUP4_POPTR	1	1379	1379	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15475.1	1	1328	1328	45.63	1328	43	0
Target_name	Start	End	Length	Cov(%)
AT5G47490.1	1	1361	1361	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold175	Augustus	mRNA	208261	216013	.	+	.	ID=Dca15475.1;Parent=Dca15475
scaffold175	Augustus	exon	208261	209862	.	+	.	ID=Dca15475.1.exon1;Parent=Dca15475.1
scaffold175	Augustus	exon	209969	210286	.	+	.	ID=Dca15475.1.exon2;Parent=Dca15475.1
scaffold175	Augustus	exon	211031	211159	.	+	.	ID=Dca15475.1.exon3;Parent=Dca15475.1
scaffold175	Augustus	exon	211237	211359	.	+	.	ID=Dca15475.1.exon4;Parent=Dca15475.1
scaffold175	Augustus	exon	211459	211629	.	+	.	ID=Dca15475.1.exon5;Parent=Dca15475.1
scaffold175	Augustus	exon	212490	212624	.	+	.	ID=Dca15475.1.exon6;Parent=Dca15475.1
scaffold175	Augustus	exon	213857	213984	.	+	.	ID=Dca15475.1.exon7;Parent=Dca15475.1
scaffold175	Augustus	exon	214060	214168	.	+	.	ID=Dca15475.1.exon8;Parent=Dca15475.1
scaffold175	Augustus	exon	214251	214556	.	+	.	ID=Dca15475.1.exon9;Parent=Dca15475.1
scaffold175	Augustus	exon	214693	214860	.	+	.	ID=Dca15475.1.exon10;Parent=Dca15475.1
scaffold175	Augus-PASA	exon	214970	215268	.	+	.	ID=Dca15475.1.exon11;Parent=Dca15475.1
scaffold175	Augus-PASA	exon	215515	216013	.	+	.	ID=Dca15475.1.exon12;Parent=Dca15475.1