Dca15478.1
Annotation
- 4-exons
- f-1
- sp|D7U3N1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0229g00020#GO:0005737;GO:0004816;GO:0005524;GO:0003676;GO:0006421#3F1P1C
- AT4G17300.1 | Symbols: NS1, OVA8, ATNS1 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr4:9681558-9684833 FORWARD LENGTH=567
- Repeat List (scaffold175)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15478.1 |
24 |
114 |
132 |
45.45 |
91 |
64 |
3e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7U3N1_VITVI |
81 |
174 |
584 |
16.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15478.1 |
7 |
114 |
132 |
52.27 |
108 |
59 |
8e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G17300.1 |
42 |
157 |
567 |
20.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold175 |
Augustus |
mRNA |
238981 |
241850 |
. |
- |
. |
ID=Dca15478.1;Parent=Dca15478 |
| scaffold175 |
Augustus |
exon |
238981 |
239046 |
. |
- |
. |
ID=Dca15478.1.exon1;Parent=Dca15478.1 |
| scaffold175 |
Augustus |
exon |
240257 |
240325 |
. |
- |
. |
ID=Dca15478.1.exon2;Parent=Dca15478.1 |
| scaffold175 |
Augustus |
exon |
240425 |
240624 |
. |
- |
. |
ID=Dca15478.1.exon3;Parent=Dca15478.1 |
| scaffold175 |
Augustus |
exon |
241787 |
241850 |
. |
- |
. |
ID=Dca15478.1.exon4;Parent=Dca15478.1 |
