Dca15506.1
Annotation
- 4-exons
- f-1
- sp|B9GV68_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_756117#GO:0005524;GO:0004832;GO:0006438#2F1P0C
- AT5G16715.1 | Symbols: EMB2247 | ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases | chr5:5485353-5493229 FORWARD LENGTH=974
- Repeat List (scaffold17502)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15506.1 |
2 |
158 |
158 |
84.17 |
157 |
85 |
8e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GV68_POPTR |
265 |
421 |
951 |
16.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15506.1 |
2 |
158 |
158 |
79.11 |
157 |
80 |
4e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G16715.1 |
298 |
454 |
974 |
16.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17502 |
Augustus |
mRNA |
199 |
2676 |
. |
- |
. |
ID=Dca15506.1;Parent=Dca15506 |
| scaffold17502 |
Augustus |
exon |
199 |
315 |
. |
- |
. |
ID=Dca15506.1.exon1;Parent=Dca15506.1 |
| scaffold17502 |
Augustus |
exon |
428 |
545 |
. |
- |
. |
ID=Dca15506.1.exon2;Parent=Dca15506.1 |
| scaffold17502 |
Augustus |
exon |
628 |
776 |
. |
- |
. |
ID=Dca15506.1.exon3;Parent=Dca15506.1 |
| scaffold17502 |
Augustus |
exon |
2587 |
2676 |
. |
- |
. |
ID=Dca15506.1.exon4;Parent=Dca15506.1 |
