Dca15521.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1751)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15521.1 |
23 |
149 |
149 |
48.99 |
127 |
56 |
5e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
779 |
910 |
964 |
13.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15521.1 |
50 |
149 |
149 |
23.48 |
100 |
35 |
5e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
447 |
544 |
1262 |
7.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1751 |
Augustus |
mRNA |
67665 |
68910 |
. |
- |
. |
ID=Dca15521.1;Parent=Dca15521 |
| scaffold1751 |
Augustus |
exon |
67665 |
67966 |
. |
- |
. |
ID=Dca15521.1.exon1;Parent=Dca15521.1 |
| scaffold1751 |
Augustus |
exon |
68763 |
68910 |
. |
- |
. |
ID=Dca15521.1.exon2;Parent=Dca15521.1 |
