Carnation DB

Dca15527.1

Annotation

6-exons
f-1
sp|Q42620_BRANA#CTP:phosphocholine cytidylyltransferase#Brassica napus (Rape)#Name=CCT#GO:0004105#1F0P0C
Repeat List (scaffold17518)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15527.1	12	211	211	82.93	200	88	4e-104
Target_name	Start	End	Length	Cov(%)
sp\|Q42620_BRANA	21	220	329	60.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15527.1	20	211	211	81.99	192	90	5e-103
Target_name	Start	End	Length	Cov(%)
AT2G32260.1	29	221	332	58.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold17518	Augustus	mRNA	802	2770	.	+	.	ID=Dca15527.1;Parent=Dca15527
scaffold17518	Augustus	exon	802	953	.	+	.	ID=Dca15527.1.exon1;Parent=Dca15527.1
scaffold17518	Augustus	exon	1309	1422	.	+	.	ID=Dca15527.1.exon2;Parent=Dca15527.1
scaffold17518	Augustus	exon	1977	2072	.	+	.	ID=Dca15527.1.exon3;Parent=Dca15527.1
scaffold17518	Augustus	exon	2293	2335	.	+	.	ID=Dca15527.1.exon4;Parent=Dca15527.1
scaffold17518	Augustus	exon	2424	2579	.	+	.	ID=Dca15527.1.exon5;Parent=Dca15527.1
scaffold17518	Augustus	exon	2696	2770	.	+	.	ID=Dca15527.1.exon6;Parent=Dca15527.1