Dca15552.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1754)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15552.1 |
2 |
146 |
149 |
72.48 |
145 |
60 |
3e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
316 |
964 |
18.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15552.1 |
2 |
146 |
149 |
42.95 |
145 |
35 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
731 |
1428 |
12.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1754 |
Augustus |
mRNA |
58585 |
59137 |
. |
+ |
. |
ID=Dca15552.1;Parent=Dca15552 |
| scaffold1754 |
Augustus |
exon |
58585 |
58767 |
. |
+ |
. |
ID=Dca15552.1.exon1;Parent=Dca15552.1 |
| scaffold1754 |
Augustus |
exon |
58871 |
59137 |
. |
+ |
. |
ID=Dca15552.1.exon2;Parent=Dca15552.1 |
