Carnation DB

Dca15589.1

Annotation

6-exons
f-1
sp|B9N243_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580810#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT3G47110.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17347103-17350296 REVERSE LENGTH=1025
Repeat List (scaffold1757)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15589.1	6	292	406	33.99	287	41	8e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9N243_POPTR	693	1021	1022	32.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15589.1	9	286	406	31.77	278	41	1e-56
Target_name	Start	End	Length	Cov(%)
AT3G47110.1	706	1019	1025	30.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1757	Augustus	mRNA	62192	66460	.	-	.	ID=Dca15589.1;Parent=Dca15589
scaffold1757	Augustus	exon	62192	62454	.	-	.	ID=Dca15589.1.exon1;Parent=Dca15589.1
scaffold1757	Augustus	exon	62705	62770	.	-	.	ID=Dca15589.1.exon2;Parent=Dca15589.1
scaffold1757	Augustus	exon	64979	65326	.	-	.	ID=Dca15589.1.exon3;Parent=Dca15589.1
scaffold1757	Augustus	exon	65601	65628	.	-	.	ID=Dca15589.1.exon4;Parent=Dca15589.1
scaffold1757	Augustus	exon	65875	66135	.	-	.	ID=Dca15589.1.exon5;Parent=Dca15589.1
scaffold1757	Augustus	exon	66206	66460	.	-	.	ID=Dca15589.1.exon6;Parent=Dca15589.1