Carnation DB

Dca15637.1

Annotation

6-exons
f-1
sp|A5AQ65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0129g00170#GO:0005741;GO:0008308#1F0P1C
sp|B9H6N6_POPTR#Porin/voltage-dependent anion-selective channel protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_831445#GO:0005741;GO:0008308#1F0P1C
Repeat List (scaffold176)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15637.1	1	276	276	76.08	276	77	3e-121
Target_name	Start	End	Length	Cov(%)
sp\|A5AQ65_VITVI	1	276	276	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15637.1	1	276	276	67.75	276	62	1e-105
Target_name	Start	End	Length	Cov(%)
AT5G67500.2	1	303	303	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold176	Augustus	mRNA	143280	146536	.	+	.	ID=Dca15637.1;Parent=Dca15637
scaffold176	Augustus	exon	143280	143328	.	+	.	ID=Dca15637.1.exon1;Parent=Dca15637.1
scaffold176	Augustus	exon	143417	143484	.	+	.	ID=Dca15637.1.exon2;Parent=Dca15637.1
scaffold176	Augustus	exon	145562	145672	.	+	.	ID=Dca15637.1.exon3;Parent=Dca15637.1
scaffold176	Augustus	exon	145750	145836	.	+	.	ID=Dca15637.1.exon4;Parent=Dca15637.1
scaffold176	Augustus	exon	145932	146140	.	+	.	ID=Dca15637.1.exon5;Parent=Dca15637.1
scaffold176	Augustus	exon	146230	146536	.	+	.	ID=Dca15637.1.exon6;Parent=Dca15637.1