Carnation DB

Dca15643.1

Annotation

5-exons
f-1
sp|D7TND4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g01750#GO:0005488#1F0P0C
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:771641-773482 REVERSE LENGTH=613
Repeat List (scaffold176)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15643.1	385	591	623	10.59	207	30	9e-18
Target_name	Start	End	Length	Cov(%)
sp\|D7TND4_VITVI	319	535	617	35.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15643.1	348	623	623	21.02	276	48	6e-71
Target_name	Start	End	Length	Cov(%)
AT2G02750.1	48	324	613	45.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold176	Augustus	mRNA	168918	173040	.	+	.	ID=Dca15643.1;Parent=Dca15643
scaffold176	Augustus	exon	168918	169674	.	+	.	ID=Dca15643.1.exon1;Parent=Dca15643.1
scaffold176	Augustus	exon	169780	169850	.	+	.	ID=Dca15643.1.exon2;Parent=Dca15643.1
scaffold176	Augustus	exon	170450	170540	.	+	.	ID=Dca15643.1.exon3;Parent=Dca15643.1
scaffold176	Augustus	exon	171083	171180	.	+	.	ID=Dca15643.1.exon4;Parent=Dca15643.1
scaffold176	Augustus	exon	172186	173040	.	+	.	ID=Dca15643.1.exon5;Parent=Dca15643.1