Carnation DB

Dca15734.1

Annotation

14-exons
f-1
sp|B9HGZ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562210#GO:0005783;GO:0005509;GO:0051082;GO:0006457#2F1P1C
AT1G08450.1 | Symbols: CRT3, PSL1, EBS2, AtCRT3 | calreticulin 3 | chr1:2668008-2671800 REVERSE LENGTH=424
Repeat List (scaffold1767)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15734.1	4	428	428	80.84	425	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HGZ3_POPTR	7	424	424	98.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15734.1	13	428	428	73.59	416	76	0
Target_name	Start	End	Length	Cov(%)
AT1G08450.1	10	424	424	97.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1767	Augus-PASA	mRNA	42168	47200	.	+	.	ID=Dca15734.1;Parent=Dca15734
scaffold1767	Augus-PASA	exon	42168	42288	.	+	.	ID=Dca15734.1.exon1;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	42996	43103	.	+	.	ID=Dca15734.1.exon2;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	44250	44442	.	+	.	ID=Dca15734.1.exon3;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	44618	44876	.	+	.	ID=Dca15734.1.exon4;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	45005	45061	.	+	.	ID=Dca15734.1.exon5;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	45158	45205	.	+	.	ID=Dca15734.1.exon6;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	45291	45377	.	+	.	ID=Dca15734.1.exon7;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	45477	45534	.	+	.	ID=Dca15734.1.exon8;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	45774	45841	.	+	.	ID=Dca15734.1.exon9;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	46084	46179	.	+	.	ID=Dca15734.1.exon10;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	46339	46395	.	+	.	ID=Dca15734.1.exon11;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	46509	46598	.	+	.	ID=Dca15734.1.exon12;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	46797	46829	.	+	.	ID=Dca15734.1.exon13;Parent=Dca15734.1
scaffold1767	Augus-PASA	exon	47189	47200	.	+	.	ID=Dca15734.1.exon14;Parent=Dca15734.1