Carnation DB

Dca15746.1

Annotation

7-exons
f-1
sp|B9HZX5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_771849#unknown#0F0P0C
AT3G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:5216630-5219868 REVERSE LENGTH=883
Repeat List (scaffold1768)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15746.1	267	953	953	53.51	687	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HZX5_POPTR	229	882	882	74.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15746.1	9	953	953	56.76	945	56	0
Target_name	Start	End	Length	Cov(%)
AT3G15470.1	5	883	883	99.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1768	Augustus	mRNA	67316	72415	.	-	.	ID=Dca15746.1;Parent=Dca15746
scaffold1768	Augustus	exon	67316	67914	.	-	.	ID=Dca15746.1.exon1;Parent=Dca15746.1
scaffold1768	Augustus	exon	68791	68959	.	-	.	ID=Dca15746.1.exon2;Parent=Dca15746.1
scaffold1768	Augustus	exon	69091	69173	.	-	.	ID=Dca15746.1.exon3;Parent=Dca15746.1
scaffold1768	Augustus	exon	69324	69375	.	-	.	ID=Dca15746.1.exon4;Parent=Dca15746.1
scaffold1768	Augustus	exon	69489	69646	.	-	.	ID=Dca15746.1.exon5;Parent=Dca15746.1
scaffold1768	Augustus	exon	69743	69833	.	-	.	ID=Dca15746.1.exon6;Parent=Dca15746.1
scaffold1768	Augustus	exon	70706	72415	.	-	.	ID=Dca15746.1.exon7;Parent=Dca15746.1