Carnation DB

Dca15773.1

Annotation

7-exons
f-1
sp|D7U2X4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g03050#GO:0005488#1F0P0C
AT3G58180.1 | Symbols: | ARM repeat superfamily protein | chr3:21544189-21545981 FORWARD LENGTH=314
Repeat List (scaffold177)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15773.1	3	307	310	77.09	305	78	3e-134
Target_name	Start	End	Length	Cov(%)
sp\|D7U2X4_VITVI	6	315	315	98.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15773.1	6	136	310	18.7	131	45	2e-21
Target_name	Start	End	Length	Cov(%)
AT3G58180.1	166	295	314	41.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold177	Augus-PASA	mRNA	171218	174128	.	-	.	ID=Dca15773.1;Parent=Dca15773
scaffold177	Augus-PASA	exon	171218	171259	.	-	.	ID=Dca15773.1.exon1;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	171480	171598	.	-	.	ID=Dca15773.1.exon2;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	171766	171892	.	-	.	ID=Dca15773.1.exon3;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	172211	172349	.	-	.	ID=Dca15773.1.exon4;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	172477	172697	.	-	.	ID=Dca15773.1.exon5;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	172786	172919	.	-	.	ID=Dca15773.1.exon6;Parent=Dca15773.1
scaffold177	Augus-PASA	exon	173978	174128	.	-	.	ID=Dca15773.1.exon7;Parent=Dca15773.1