Dca15774.1
Annotation
- 4-exons
- f-1
- sp|B9SCE7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1271010#unknown#0F0P0C
- AT1G53645.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr1:20026434-20028587 REVERSE LENGTH=523
- Repeat List (scaffold177)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15774.1 |
95 |
467 |
468 |
36.32 |
373 |
44 |
3e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SCE7_RICCO |
94 |
435 |
436 |
78.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15774.1 |
228 |
468 |
468 |
28.2 |
241 |
51 |
2e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53645.1 |
264 |
523 |
523 |
49.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold177 |
Augus-PASA |
mRNA |
180001 |
182861 |
. |
+ |
. |
ID=Dca15774.1;Parent=Dca15774 |
| scaffold177 |
Augus-PASA |
exon |
180001 |
180990 |
. |
+ |
. |
ID=Dca15774.1.exon1;Parent=Dca15774.1 |
| scaffold177 |
Augus-PASA |
exon |
181073 |
181222 |
. |
+ |
. |
ID=Dca15774.1.exon2;Parent=Dca15774.1 |
| scaffold177 |
Augus-PASA |
exon |
181915 |
182100 |
. |
+ |
. |
ID=Dca15774.1.exon3;Parent=Dca15774.1 |
| scaffold177 |
Augus-PASA |
exon |
182781 |
182861 |
. |
+ |
. |
ID=Dca15774.1.exon4;Parent=Dca15774.1 |
