Carnation DB

Dca15781.1

Annotation

2-exons
f-1
sp|B9GS45_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830083#unknown#0F0P0C
AT4G03030.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:1335942-1337270 REVERSE LENGTH=442
Repeat List (scaffold177)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15781.1	9	425	425	54.82	417	56	2e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9GS45_POPTR	13	414	414	97.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15781.1	9	425	425	49.17	417	50	1e-109
Target_name	Start	End	Length	Cov(%)
AT4G03030.1	31	442	442	93.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold177	Augustus	mRNA	244360	246207	.	-	.	ID=Dca15781.1;Parent=Dca15781
scaffold177	Augustus	exon	244360	244651	.	-	.	ID=Dca15781.1.exon1;Parent=Dca15781.1
scaffold177	Augustus	exon	245222	246207	.	-	.	ID=Dca15781.1.exon2;Parent=Dca15781.1
scaffold177	Augustus	mRNA	244360	245054	.	-	.	ID=Dca15781.2;Parent=Dca15781
scaffold177	Augustus	exon	244360	244651	.	-	.	ID=Dca15781.2.exon1;Parent=Dca15781.2
scaffold177	Augustus	exon	244969	245054	.	-	.	ID=Dca15781.2.exon2;Parent=Dca15781.2