Dca15800.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1771)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15800.1 |
63 |
281 |
295 |
27.45 |
219 |
37 |
7e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
11 |
232 |
1501 |
14.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15800.1 |
93 |
273 |
295 |
18.3 |
181 |
30 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
85 |
265 |
296 |
61.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1771 |
Augustus |
mRNA |
78909 |
80704 |
. |
+ |
. |
ID=Dca15800.1;Parent=Dca15800 |
| scaffold1771 |
Augustus |
exon |
78909 |
79012 |
. |
+ |
. |
ID=Dca15800.1.exon1;Parent=Dca15800.1 |
| scaffold1771 |
Augustus |
exon |
79921 |
80704 |
. |
+ |
. |
ID=Dca15800.1.exon2;Parent=Dca15800.1 |
