Carnation DB

Dca15804.1

Annotation

5-exons
f-1
sp|B9RW55_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1176220#GO:0030515;GO:0042254;GO:0031120#1F2P0C
AT1G03530.1 | Symbols: ATNAF1, NAF1 | nuclear assembly factor 1 | chr1:880638-883338 REVERSE LENGTH=801
Repeat List (scaffold1772)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15804.1	409	850	862	24.01	442	46	2e-84
Target_name	Start	End	Length	Cov(%)
sp\|B9RW55_RICCO	372	768	786	50.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15804.1	400	599	862	14.03	200	59	1e-65
Target_name	Start	End	Length	Cov(%)
AT1G03530.1	342	547	801	25.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1772	Augustus	mRNA	16080	22156	.	+	.	ID=Dca15804.1;Parent=Dca15804
scaffold1772	Augustus	exon	16080	16192	.	+	.	ID=Dca15804.1.exon1;Parent=Dca15804.1
scaffold1772	Augustus	exon	16733	16818	.	+	.	ID=Dca15804.1.exon2;Parent=Dca15804.1
scaffold1772	Augustus	exon	18999	20062	.	+	.	ID=Dca15804.1.exon3;Parent=Dca15804.1
scaffold1772	Augustus	exon	20688	20765	.	+	.	ID=Dca15804.1.exon4;Parent=Dca15804.1
scaffold1772	Augustus	exon	20909	22156	.	+	.	ID=Dca15804.1.exon5;Parent=Dca15804.1