Dca15808.1
Annotation
- 4-exons
- f-1
- sp|B9RNC6_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1346580#GO:0005488#1F0P0C
- Repeat List (scaffold1772)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15808.1 |
28 |
435 |
437 |
38.21 |
408 |
35 |
9e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RNC6_RICCO |
21 |
502 |
504 |
95.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15808.1 |
25 |
435 |
437 |
36.15 |
411 |
33 |
7e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G02370.1 |
49 |
536 |
537 |
90.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1772 |
Augustus |
mRNA |
36951 |
39152 |
. |
- |
. |
ID=Dca15808.1;Parent=Dca15808 |
| scaffold1772 |
Augustus |
exon |
36951 |
37424 |
. |
- |
. |
ID=Dca15808.1.exon1;Parent=Dca15808.1 |
| scaffold1772 |
Augustus |
exon |
37518 |
37713 |
. |
- |
. |
ID=Dca15808.1.exon2;Parent=Dca15808.1 |
| scaffold1772 |
Augustus |
exon |
37838 |
38193 |
. |
- |
. |
ID=Dca15808.1.exon3;Parent=Dca15808.1 |
| scaffold1772 |
Augustus |
exon |
38865 |
39152 |
. |
- |
. |
ID=Dca15808.1.exon4;Parent=Dca15808.1 |
