Dca15837.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q53KB3_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g26410#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1775)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15837.1 |
1 |
111 |
247 |
35.62 |
111 |
80 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1085 |
1195 |
1717 |
6.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15837.1 |
8 |
111 |
247 |
19.43 |
104 |
47 |
4e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
448 |
551 |
707 |
14.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1775 |
Augustus |
mRNA |
35320 |
37401 |
. |
- |
. |
ID=Dca15837.1;Parent=Dca15837 |
| scaffold1775 |
Augustus |
exon |
35320 |
35745 |
. |
- |
. |
ID=Dca15837.1.exon1;Parent=Dca15837.1 |
| scaffold1775 |
Augustus |
exon |
37084 |
37401 |
. |
- |
. |
ID=Dca15837.1.exon2;Parent=Dca15837.1 |
