Dca15842.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1775)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15842.1 |
63 |
301 |
370 |
40 |
239 |
55 |
5e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
478 |
750 |
1717 |
15.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15842.1 |
88 |
168 |
370 |
7.83 |
81 |
36 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
177 |
192 |
41.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1775 |
Augustus |
mRNA |
84227 |
89781 |
. |
+ |
. |
ID=Dca15842.1;Parent=Dca15842 |
| scaffold1775 |
Augustus |
exon |
84227 |
84737 |
. |
+ |
. |
ID=Dca15842.1.exon1;Parent=Dca15842.1 |
| scaffold1775 |
Augustus |
exon |
84842 |
85442 |
. |
+ |
. |
ID=Dca15842.1.exon2;Parent=Dca15842.1 |
| scaffold1775 |
Augustus |
exon |
86530 |
86615 |
. |
+ |
. |
ID=Dca15842.1.exon3;Parent=Dca15842.1 |
| scaffold1775 |
Augustus |
exon |
88883 |
89781 |
. |
+ |
. |
ID=Dca15842.1.exon4;Parent=Dca15842.1 |
