Carnation DB

Dca15852.1

Annotation

9-exons
f-1
sp|F2CUW2_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0051287;GO:0050661;GO:0016620;GO:0006006#3F1P0C
AT1G42970.1 | Symbols: GAPB | glyceraldehyde-3-phosphate dehydrogenase B subunit | chr1:16127552-16129584 FORWARD LENGTH=447
Repeat List (scaffold1776)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15852.1	36	401	403	69.47	366	72	6e-152
Target_name	Start	End	Length	Cov(%)
sp\|F2CUW2_HORVD	64	442	444	85.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15852.1	74	401	403	68.98	328	80	8e-151
Target_name	Start	End	Length	Cov(%)
AT1G42970.1	97	446	447	78.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1776	Augustus	mRNA	41954	45893	.	+	.	ID=Dca15852.1;Parent=Dca15852
scaffold1776	Augustus	exon	41954	42065	.	+	.	ID=Dca15852.1.exon1;Parent=Dca15852.1
scaffold1776	Augustus	exon	42602	42713	.	+	.	ID=Dca15852.1.exon2;Parent=Dca15852.1
scaffold1776	Augustus	exon	43774	43847	.	+	.	ID=Dca15852.1.exon3;Parent=Dca15852.1
scaffold1776	Augustus	exon	43979	44073	.	+	.	ID=Dca15852.1.exon4;Parent=Dca15852.1
scaffold1776	Augustus	exon	44182	44342	.	+	.	ID=Dca15852.1.exon5;Parent=Dca15852.1
scaffold1776	Augustus	exon	44423	44484	.	+	.	ID=Dca15852.1.exon6;Parent=Dca15852.1
scaffold1776	Augustus	exon	44576	44625	.	+	.	ID=Dca15852.1.exon7;Parent=Dca15852.1
scaffold1776	Augustus	exon	44714	45120	.	+	.	ID=Dca15852.1.exon8;Parent=Dca15852.1
scaffold1776	Augustus	exon	45755	45893	.	+	.	ID=Dca15852.1.exon9;Parent=Dca15852.1