Dca15858.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold17763)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15858.1 |
60 |
225 |
226 |
46.46 |
166 |
62 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
257 |
426 |
964 |
17.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15858.1 |
70 |
164 |
226 |
17.25 |
95 |
40 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
665 |
762 |
1401 |
6.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17763 |
Augustus |
mRNA |
1156 |
3677 |
. |
+ |
. |
ID=Dca15858.1;Parent=Dca15858 |
| scaffold17763 |
Augustus |
exon |
1156 |
1357 |
. |
+ |
. |
ID=Dca15858.1.exon1;Parent=Dca15858.1 |
| scaffold17763 |
Augustus |
exon |
3199 |
3677 |
. |
+ |
. |
ID=Dca15858.1.exon2;Parent=Dca15858.1 |
