Carnation DB

Dca15909.1

Annotation

8-exons
f-1
sp|F6I649_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g02210#GO:0008270#1F0P0C
sp|B9RDX8_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1616630#GO:0008270#1F0P0C
Repeat List (scaffold178)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15909.1	9	561	564	45.74	553	41	5e-103
Target_name	Start	End	Length	Cov(%)
sp\|F6I649_VITVI	5	594	597	98.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15909.1	476	563	564	6.02	88	35	6e-09
Target_name	Start	End	Length	Cov(%)
AT4G01270.1	407	505	506	19.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold178	Augustus	mRNA	155832	159809	.	-	.	ID=Dca15909.1;Parent=Dca15909
scaffold178	Augustus	exon	155832	155948	.	-	.	ID=Dca15909.1.exon1;Parent=Dca15909.1
scaffold178	Augustus	exon	156465	156631	.	-	.	ID=Dca15909.1.exon2;Parent=Dca15909.1
scaffold178	Augustus	exon	156729	157425	.	-	.	ID=Dca15909.1.exon3;Parent=Dca15909.1
scaffold178	Augustus	exon	157520	157622	.	-	.	ID=Dca15909.1.exon4;Parent=Dca15909.1
scaffold178	Augustus	exon	157992	158108	.	-	.	ID=Dca15909.1.exon5;Parent=Dca15909.1
scaffold178	Augustus	exon	158218	158300	.	-	.	ID=Dca15909.1.exon6;Parent=Dca15909.1
scaffold178	Augustus	exon	158672	158951	.	-	.	ID=Dca15909.1.exon7;Parent=Dca15909.1
scaffold178	Augustus	exon	159679	159809	.	-	.	ID=Dca15909.1.exon8;Parent=Dca15909.1