Carnation DB

Dca15946.1

Annotation

5-exons
f-1
sp|A9PE83_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0000166#2F0P0C
sp|B9SRC6_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0614010#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold1782)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15946.1	3	284	284	66.9	282	67	6e-103
Target_name	Start	End	Length	Cov(%)
sp\|A9PE83_POPTR	2	280	280	99.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15946.1	3	274	284	63.73	272	66	6e-98
Target_name	Start	End	Length	Cov(%)
AT4G17720.1	2	277	313	88.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1782	Augustus	mRNA	40454	43095	.	+	.	ID=Dca15946.1;Parent=Dca15946
scaffold1782	Augustus	exon	40454	40462	.	+	.	ID=Dca15946.1.exon1;Parent=Dca15946.1
scaffold1782	Augustus	exon	41836	41939	.	+	.	ID=Dca15946.1.exon2;Parent=Dca15946.1
scaffold1782	Augustus	exon	42034	42109	.	+	.	ID=Dca15946.1.exon3;Parent=Dca15946.1
scaffold1782	Augustus	exon	42344	42427	.	+	.	ID=Dca15946.1.exon4;Parent=Dca15946.1
scaffold1782	Augustus	exon	42514	43095	.	+	.	ID=Dca15946.1.exon5;Parent=Dca15946.1