Dca15956.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold17830)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15956.1 |
10 |
150 |
314 |
14.01 |
141 |
32 |
8e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
126 |
266 |
1313 |
10.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15956.1 |
142 |
227 |
314 |
10.19 |
86 |
38 |
8e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
586 |
671 |
1428 |
6.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17830 |
Augustus |
mRNA |
461 |
3283 |
. |
+ |
. |
ID=Dca15956.1;Parent=Dca15956 |
| scaffold17830 |
Augustus |
exon |
461 |
882 |
. |
+ |
. |
ID=Dca15956.1.exon1;Parent=Dca15956.1 |
| scaffold17830 |
Augustus |
exon |
2419 |
2630 |
. |
+ |
. |
ID=Dca15956.1.exon2;Parent=Dca15956.1 |
| scaffold17830 |
Augustus |
exon |
2973 |
3283 |
. |
+ |
. |
ID=Dca15956.1.exon3;Parent=Dca15956.1 |
