Carnation DB

Dca15980.1

Annotation

6-exons
f-1
sp|E0CTT3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01970#GO:0005524;GO:0004674#2F0P0C
sp|B9S327_RICCO#Serine/threonine-protein kinase PBS1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1194910#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold1785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15980.1	1	377	379	78.62	377	80	3e-175
Target_name	Start	End	Length	Cov(%)
sp\|E0CTT3_VITVI	21	395	398	94.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15980.1	1	373	379	74.67	373	76	2e-165
Target_name	Start	End	Length	Cov(%)
AT3G58690.1	21	392	400	93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1785	Augustus	mRNA	42666	45426	.	+	.	ID=Dca15980.1;Parent=Dca15980
scaffold1785	Augustus	exon	42666	42759	.	+	.	ID=Dca15980.1.exon1;Parent=Dca15980.1
scaffold1785	Augustus	exon	43802	44046	.	+	.	ID=Dca15980.1.exon2;Parent=Dca15980.1
scaffold1785	Augustus	exon	44156	44291	.	+	.	ID=Dca15980.1.exon3;Parent=Dca15980.1
scaffold1785	Augustus	exon	44473	44731	.	+	.	ID=Dca15980.1.exon4;Parent=Dca15980.1
scaffold1785	Augustus	exon	44815	44947	.	+	.	ID=Dca15980.1.exon5;Parent=Dca15980.1
scaffold1785	Augustus	exon	45154	45426	.	+	.	ID=Dca15980.1.exon6;Parent=Dca15980.1