Carnation DB

Dca15981.1

Annotation

5-exons
f-1
sp|D5A7U4_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Os02t0266100-02 Zinc finger, U1-C type domain containing protein.
Repeat List (scaffold1785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15981.1	1	210	219	51.14	210	48	8e-38
Target_name	Start	End	Length	Cov(%)
sp\|D5A7U4_PICSI	1	231	244	94.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15981.1	1	142	219	42.92	142	62	6e-39
Target_name	Start	End	Length	Cov(%)
Os02t0266100-02	1	148	229	64.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1785	Augus-PASA	mRNA	47332	51418	.	+	.	ID=Dca15981.1;Parent=Dca15981
scaffold1785	Augus-PASA	exon	47332	47339	.	+	.	ID=Dca15981.1.exon1;Parent=Dca15981.1
scaffold1785	Augus-PASA	exon	47460	47502	.	+	.	ID=Dca15981.1.exon2;Parent=Dca15981.1
scaffold1785	Augus-PASA	exon	48606	48647	.	+	.	ID=Dca15981.1.exon3;Parent=Dca15981.1
scaffold1785	Augus-PASA	exon	48783	49032	.	+	.	ID=Dca15981.1.exon4;Parent=Dca15981.1
scaffold1785	Augus-PASA	exon	51102	51418	.	+	.	ID=Dca15981.1.exon5;Parent=Dca15981.1