Carnation DB

Dca16505.1

Annotation

6-exons
f-1
sp|E2F3S9_TOBAC#G-strand specific single-stranded telomere-binding protein 2#Nicotiana tabacum (Common tobacco)#Name=GTBP2#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold1817)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16505.1	12	232	338	49.11	221	75	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|E2F3S9_TOBAC	10	230	337	65.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16505.1	1	100	338	10.94	100	37	1e-13
Target_name	Start	End	Length	Cov(%)
AT3G13224.2	93	194	358	28.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1817	Augus-PASA	mRNA	48944	51854	.	-	.	ID=Dca16505.1;Parent=Dca16505
scaffold1817	Augus-PASA	exon	48944	49432	.	-	.	ID=Dca16505.1.exon1;Parent=Dca16505.1
scaffold1817	Augus-PASA	exon	49695	49864	.	-	.	ID=Dca16505.1.exon2;Parent=Dca16505.1
scaffold1817	Augus-PASA	exon	49994	50096	.	-	.	ID=Dca16505.1.exon3;Parent=Dca16505.1
scaffold1817	Augus-PASA	exon	51417	51580	.	-	.	ID=Dca16505.1.exon4;Parent=Dca16505.1
scaffold1817	Augus-PASA	exon	51678	51718	.	-	.	ID=Dca16505.1.exon5;Parent=Dca16505.1
scaffold1817	Augus-PASA	exon	51805	51854	.	-	.	ID=Dca16505.1.exon6;Parent=Dca16505.1