Dca1652.1
Annotation
- 2-exons
- f-1
- sp|Q2QSI5_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g23990#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold10505)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1652.1 |
4 |
765 |
809 |
36.83 |
762 |
39 |
1e-152
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QSI5_ORYSJ |
1126 |
1869 |
1873 |
39.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1652.1 |
10 |
376 |
809 |
14.33 |
367 |
32 |
7e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
217 |
575 |
707 |
50.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10505 |
Augustus |
mRNA |
3103 |
6624 |
. |
- |
. |
ID=Dca1652.1;Parent=Dca1652 |
| scaffold10505 |
Augustus |
exon |
3103 |
4411 |
. |
- |
. |
ID=Dca1652.1.exon1;Parent=Dca1652.1 |
| scaffold10505 |
Augustus |
exon |
5504 |
6624 |
. |
- |
. |
ID=Dca1652.1.exon2;Parent=Dca1652.1 |
