Dca16531.1
Annotation
- 2-exons
- f-1
- sp|Q9XII7_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16000#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold182)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16531.1 |
9 |
1232 |
1236 |
38.59 |
1224 |
38 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9XII7_ARATH |
118 |
1308 |
1454 |
81.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16531.1 |
336 |
1227 |
1236 |
26.13 |
892 |
34 |
1e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
1275 |
1428 |
64.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold182 |
Augustus |
mRNA |
34660 |
38475 |
. |
- |
. |
ID=Dca16531.1;Parent=Dca16531 |
| scaffold182 |
Augustus |
exon |
34660 |
36126 |
. |
- |
. |
ID=Dca16531.1.exon1;Parent=Dca16531.1 |
| scaffold182 |
Augustus |
exon |
36232 |
38475 |
. |
- |
. |
ID=Dca16531.1.exon2;Parent=Dca16531.1 |
