Dca16535.1
Annotation
- 3-exons
- f-1
- sp|B9HES1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832238#GO:0005516;GO:0015979#1F1P0C
- Os12t0189400-01 Similar to Photosystem I reaction centre subunit N, chloroplast precursor (PSI- N).
- Repeat List (scaffold182)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16535.1 |
1 |
170 |
170 |
72.35 |
170 |
72 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HES1_POPTR |
1 |
172 |
172 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16535.1 |
27 |
170 |
170 |
57.64 |
144 |
69 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0189400-01 |
16 |
149 |
150 |
89.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold182 |
Augus-PASA |
mRNA |
69663 |
70659 |
. |
+ |
. |
ID=Dca16535.1;Parent=Dca16535 |
| scaffold182 |
Augus-PASA |
exon |
69663 |
69959 |
. |
+ |
. |
ID=Dca16535.1.exon1;Parent=Dca16535.1 |
| scaffold182 |
Augus-PASA |
exon |
70188 |
70313 |
. |
+ |
. |
ID=Dca16535.1.exon2;Parent=Dca16535.1 |
| scaffold182 |
Augus-PASA |
exon |
70570 |
70659 |
. |
+ |
. |
ID=Dca16535.1.exon3;Parent=Dca16535.1 |
