Dca16539.1
Annotation
- 3-exons
- f-1
- sp|B9HVN9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769424#unknown#0F0P0C
- sp|B9S7B3_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0775780#unknown#0F0P0C
- Repeat List (scaffold182)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16539.1 |
33 |
366 |
381 |
58.26 |
334 |
65 |
2e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HVN9_POPTR |
47 |
389 |
404 |
84.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16539.1 |
4 |
376 |
381 |
56.95 |
373 |
59 |
9e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G14590.1 |
15 |
376 |
386 |
93.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold182 |
Augustus |
mRNA |
119270 |
120850 |
. |
+ |
. |
ID=Dca16539.1;Parent=Dca16539 |
| scaffold182 |
Augustus |
exon |
119270 |
119503 |
. |
+ |
. |
ID=Dca16539.1.exon1;Parent=Dca16539.1 |
| scaffold182 |
Augustus |
exon |
119704 |
120069 |
. |
+ |
. |
ID=Dca16539.1.exon2;Parent=Dca16539.1 |
| scaffold182 |
Augustus |
exon |
120305 |
120850 |
. |
+ |
. |
ID=Dca16539.1.exon3;Parent=Dca16539.1 |
