Carnation DB

Dca16566.1

Annotation

9-exons
f-1
sp|D7MHB2_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_493534#unknown#0F0P0C
sp|B3LFA3_ARATH#At4g13800#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At4g13800#GO:0005886#0F0P1C
Repeat List (scaffold1821)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16566.1	563	601	622	4.01	39	65	6e-08
Target_name	Start	End	Length	Cov(%)
sp\|D7MHB2_ARALL	267	305	336	11.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16566.1	563	601	622	4.01	39	65	4e-09
Target_name	Start	End	Length	Cov(%)
AT4G13800.1	267	305	336	11.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1821	Augustus	mRNA	46526	54282	.	+	.	ID=Dca16566.1;Parent=Dca16566
scaffold1821	Augustus	exon	46526	46652	.	+	.	ID=Dca16566.1.exon1;Parent=Dca16566.1
scaffold1821	Augustus	exon	47068	47124	.	+	.	ID=Dca16566.1.exon2;Parent=Dca16566.1
scaffold1821	Augustus	exon	47319	47409	.	+	.	ID=Dca16566.1.exon3;Parent=Dca16566.1
scaffold1821	Augustus	exon	47486	47646	.	+	.	ID=Dca16566.1.exon4;Parent=Dca16566.1
scaffold1821	Augustus	exon	48096	48223	.	+	.	ID=Dca16566.1.exon5;Parent=Dca16566.1
scaffold1821	Augustus	exon	48307	48444	.	+	.	ID=Dca16566.1.exon6;Parent=Dca16566.1
scaffold1821	Augustus	exon	49560	49652	.	+	.	ID=Dca16566.1.exon7;Parent=Dca16566.1
scaffold1821	Augustus	exon	51956	52846	.	+	.	ID=Dca16566.1.exon8;Parent=Dca16566.1
scaffold1821	Augustus	exon	54100	54282	.	+	.	ID=Dca16566.1.exon9;Parent=Dca16566.1