Dca16596.1
Annotation
- 4-exons
- f-1
- sp|Q84R26_ARATH#Ribosomal protein L34#Arabidopsis thaliana (Mouse-ear cress)#Name=At3g13885#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold1824)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16596.1 |
1 |
162 |
162 |
49.38 |
162 |
50 |
7e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q84R26_ARATH |
1 |
147 |
147 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16596.1 |
91 |
162 |
162 |
30.24 |
72 |
69 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G13882.2 |
139 |
201 |
201 |
31.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1824 |
Augustus |
mRNA |
22190 |
28556 |
. |
- |
. |
ID=Dca16596.1;Parent=Dca16596 |
| scaffold1824 |
Augustus |
exon |
22190 |
22262 |
. |
- |
. |
ID=Dca16596.1.exon1;Parent=Dca16596.1 |
| scaffold1824 |
Augustus |
exon |
22532 |
22628 |
. |
- |
. |
ID=Dca16596.1.exon2;Parent=Dca16596.1 |
| scaffold1824 |
PASA |
exon |
28132 |
28224 |
. |
- |
. |
ID=Dca16596.1.exon3;Parent=Dca16596.1 |
| scaffold1824 |
Augus-PASA |
exon |
28331 |
28556 |
. |
- |
. |
ID=Dca16596.1.exon4;Parent=Dca16596.1 |
