Dca16620.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold18258)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16620.1 |
29 |
869 |
869 |
51.89 |
841 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
915 |
1501 |
59.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16620.1 |
324 |
867 |
869 |
23.59 |
544 |
38 |
6e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
602 |
707 |
77.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18258 |
Augustus |
mRNA |
74 |
2876 |
. |
- |
. |
ID=Dca16620.1;Parent=Dca16620 |
| scaffold18258 |
Augustus |
exon |
74 |
2168 |
. |
- |
. |
ID=Dca16620.1.exon1;Parent=Dca16620.1 |
| scaffold18258 |
Augustus |
exon |
2365 |
2876 |
. |
- |
. |
ID=Dca16620.1.exon2;Parent=Dca16620.1 |
