Carnation DB

Dca16645.1

Annotation

6-exons
f-1
sp|D7TR72_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g00180#GO:0005840;GO:0003735;GO:0006412#1F1P1C
AT2G20060.1 | Symbols: | Ribosomal protein L4/L1 family | chr2:8659384-8661227 FORWARD LENGTH=300
Repeat List (scaffold1828)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16645.1	2	226	226	84.51	225	85	6e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7TR72_VITVI	91	315	315	71.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16645.1	2	226	226	80.08	225	81	5e-107
Target_name	Start	End	Length	Cov(%)
AT2G20060.1	76	300	300	75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1828	Augustus	mRNA	25842	30257	.	-	.	ID=Dca16645.1;Parent=Dca16645
scaffold1828	Augustus	exon	25842	25943	.	-	.	ID=Dca16645.1.exon1;Parent=Dca16645.1
scaffold1828	Augustus	exon	26377	26550	.	-	.	ID=Dca16645.1.exon2;Parent=Dca16645.1
scaffold1828	Augustus	exon	28551	28670	.	-	.	ID=Dca16645.1.exon3;Parent=Dca16645.1
scaffold1828	Augustus	exon	28775	28882	.	-	.	ID=Dca16645.1.exon4;Parent=Dca16645.1
scaffold1828	Augustus	exon	28973	29121	.	-	.	ID=Dca16645.1.exon5;Parent=Dca16645.1
scaffold1828	Augustus	exon	30230	30257	.	-	.	ID=Dca16645.1.exon6;Parent=Dca16645.1