Dca16727.1
Annotation
- 2-exons
- f-1
- sp|Q9ZUF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05980#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1834)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16727.1 |
8 |
623 |
633 |
35.7 |
616 |
36 |
3e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUF0_ARATH |
292 |
932 |
1352 |
47.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16727.1 |
221 |
581 |
633 |
18.32 |
361 |
32 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
276 |
640 |
857 |
42.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1834 |
Augustus |
mRNA |
31561 |
33764 |
. |
+ |
. |
ID=Dca16727.1;Parent=Dca16727 |
| scaffold1834 |
Augustus |
exon |
31561 |
32395 |
. |
+ |
. |
ID=Dca16727.1.exon1;Parent=Dca16727.1 |
| scaffold1834 |
Augustus |
exon |
32698 |
33764 |
. |
+ |
. |
ID=Dca16727.1.exon2;Parent=Dca16727.1 |
