Carnation DB

Dca16743.1

Annotation

13-exons
f-1
sp|D7TFE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0087g00400#unknown#0F0P0C
sp|B3V945_LITCN#PAE#Litchi chinensis (Lychee)#unknown#unknown#0F0P0C
Repeat List (scaffold1836)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16743.1	5	382	412	59.46	378	63	3e-154
Target_name	Start	End	Length	Cov(%)
sp\|D7TFE6_VITVI	5	395	399	97.99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16743.1	4	382	412	57.28	379	61	4e-149
Target_name	Start	End	Length	Cov(%)
AT4G19420.1	2	393	397	98.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1836	Augus-PASA	mRNA	3255	6153	.	+	.	ID=Dca16743.1;Parent=Dca16743
scaffold1836	Augus-PASA	exon	3255	3375	.	+	.	ID=Dca16743.1.exon1;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	3465	3547	.	+	.	ID=Dca16743.1.exon2;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	3694	3823	.	+	.	ID=Dca16743.1.exon3;Parent=Dca16743.1
scaffold1836	Augustus	exon	3945	3985	.	+	.	ID=Dca16743.1.exon4;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	4089	4175	.	+	.	ID=Dca16743.1.exon5;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	4267	4391	.	+	.	ID=Dca16743.1.exon6;Parent=Dca16743.1
scaffold1836	Augustus	exon	4484	4544	.	+	.	ID=Dca16743.1.exon7;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	4637	4690	.	+	.	ID=Dca16743.1.exon8;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	4778	4855	.	+	.	ID=Dca16743.1.exon9;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	5060	5165	.	+	.	ID=Dca16743.1.exon10;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	5263	5408	.	+	.	ID=Dca16743.1.exon11;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	5525	5650	.	+	.	ID=Dca16743.1.exon12;Parent=Dca16743.1
scaffold1836	Augus-PASA	exon	6073	6153	.	+	.	ID=Dca16743.1.exon13;Parent=Dca16743.1