Carnation DB

Dca16744.1

Annotation

6-exons
f-1
sp|F6HJ39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0087g00420#GO:0008270#1F0P0C
Os05t0389600-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold1836)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16744.1	81	545	550	50.9	465	56	7e-134
Target_name	Start	End	Length	Cov(%)
sp\|F6HJ39_VITVI	63	556	561	88.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16744.1	140	546	550	37.63	407	50	1e-93
Target_name	Start	End	Length	Cov(%)
Os05t0389600-01	155	543	550	70.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1836	Augustus	mRNA	7119	12546	.	-	.	ID=Dca16744.1;Parent=Dca16744
scaffold1836	Augustus	exon	7119	7179	.	-	.	ID=Dca16744.1.exon1;Parent=Dca16744.1
scaffold1836	Augustus	exon	7783	7893	.	-	.	ID=Dca16744.1.exon2;Parent=Dca16744.1
scaffold1836	Augustus	exon	8280	8434	.	-	.	ID=Dca16744.1.exon3;Parent=Dca16744.1
scaffold1836	Augustus	exon	8554	8748	.	-	.	ID=Dca16744.1.exon4;Parent=Dca16744.1
scaffold1836	Augustus	exon	10177	11109	.	-	.	ID=Dca16744.1.exon5;Parent=Dca16744.1
scaffold1836	Augustus	exon	12349	12546	.	-	.	ID=Dca16744.1.exon6;Parent=Dca16744.1