Dca16762.1
Annotation
- 2-exons
- f-1
- sp|Q10M70_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g20490#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1838)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16762.1 |
585 |
1327 |
1328 |
29.96 |
743 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10M70_ORYSJ |
265 |
975 |
976 |
72.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16762.1 |
888 |
1278 |
1328 |
12.34 |
391 |
42 |
7e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
160 |
554 |
1262 |
31.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1838 |
Augustus |
mRNA |
7391 |
11661 |
. |
- |
. |
ID=Dca16762.1;Parent=Dca16762 |
| scaffold1838 |
Augustus |
exon |
7391 |
8719 |
. |
- |
. |
ID=Dca16762.1.exon1;Parent=Dca16762.1 |
| scaffold1838 |
Augustus |
exon |
9004 |
11661 |
. |
- |
. |
ID=Dca16762.1.exon2;Parent=Dca16762.1 |
