Carnation DB

Dca16793.1

Annotation

5-exons
f-1
sp|B9MYB1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_782325#unknown#0F0P0C
Repeat List (scaffold184)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16793.1	19	604	736	29.89	586	36	3e-88
Target_name	Start	End	Length	Cov(%)
sp\|B9MYB1_POPTR	11	611	655	91.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16793.1	539	601	736	3.8	63	45	2e-08
Target_name	Start	End	Length	Cov(%)
AT5G40520.2	580	642	693	9.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold184	Augustus	mRNA	52079	54979	.	-	.	ID=Dca16793.1;Parent=Dca16793
scaffold184	Augustus	exon	52079	52400	.	-	.	ID=Dca16793.1.exon1;Parent=Dca16793.1
scaffold184	Augustus	exon	52630	54323	.	-	.	ID=Dca16793.1.exon2;Parent=Dca16793.1
scaffold184	Augustus	exon	54589	54625	.	-	.	ID=Dca16793.1.exon3;Parent=Dca16793.1
scaffold184	Augustus	exon	54724	54765	.	-	.	ID=Dca16793.1.exon4;Parent=Dca16793.1
scaffold184	Augustus	exon	54864	54979	.	-	.	ID=Dca16793.1.exon5;Parent=Dca16793.1