Carnation DB

Dca16815.1

Annotation

5-exons
f-1
sp|Q0DPZ7_ORYSJ#Os03g0648200 protein#Oryza sativa subsp japonica (Rice)#Name=Os03g0648200#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
Repeat List (scaffold1840)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16815.1	306	659	767	17.07	354	37	3e-71
Target_name	Start	End	Length	Cov(%)
sp\|Q0DPZ7_ORYSJ	483	837	1015	34.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16815.1	306	658	767	16.55	353	36	8e-61
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	304	657	805	43.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1840	Augustus	mRNA	18311	27088	.	+	.	ID=Dca16815.1;Parent=Dca16815
scaffold1840	Augustus	exon	18311	18501	.	+	.	ID=Dca16815.1.exon1;Parent=Dca16815.1
scaffold1840	Augustus	exon	21168	21904	.	+	.	ID=Dca16815.1.exon2;Parent=Dca16815.1
scaffold1840	Augustus	exon	25323	25564	.	+	.	ID=Dca16815.1.exon3;Parent=Dca16815.1
scaffold1840	Augustus	exon	25855	26669	.	+	.	ID=Dca16815.1.exon4;Parent=Dca16815.1
scaffold1840	Augustus	exon	26770	27088	.	+	.	ID=Dca16815.1.exon5;Parent=Dca16815.1