Dca16823.1
Annotation
- 3-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold18408)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16823.1 |
5 |
325 |
338 |
56.8 |
321 |
58 |
3e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
1323 |
1653 |
1864 |
17.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16823.1 |
191 |
245 |
338 |
10.65 |
55 |
66 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
89 |
119 |
46.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18408 |
Augustus |
mRNA |
5147 |
8521 |
. |
- |
. |
ID=Dca16823.1;Parent=Dca16823 |
| scaffold18408 |
Augustus |
exon |
5147 |
5190 |
. |
- |
. |
ID=Dca16823.1.exon1;Parent=Dca16823.1 |
| scaffold18408 |
Augustus |
exon |
5271 |
6230 |
. |
- |
. |
ID=Dca16823.1.exon2;Parent=Dca16823.1 |
| scaffold18408 |
Augustus |
exon |
8509 |
8521 |
. |
- |
. |
ID=Dca16823.1.exon3;Parent=Dca16823.1 |
