Carnation DB

Dca16870.1

Annotation

12-exons
f-1
sp|B9I3X7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834365#GO:0030170;GO:0016769#2F0P0C
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-7985037 FORWARD LENGTH=489
Repeat List (scaffold1845)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16870.1	1	489	489	86.29	489	87	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I3X7_POPTR	1	489	489	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16870.1	1	489	489	84.66	489	85	0
Target_name	Start	End	Length	Cov(%)
AT5G23670.1	1	489	489	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1845	Augustus	mRNA	34937	40510	.	+	.	ID=Dca16870.1;Parent=Dca16870
scaffold1845	Augustus	exon	34937	35062	.	+	.	ID=Dca16870.1.exon1;Parent=Dca16870.1
scaffold1845	Augustus	exon	35297	35362	.	+	.	ID=Dca16870.1.exon2;Parent=Dca16870.1
scaffold1845	Augustus	exon	36859	36947	.	+	.	ID=Dca16870.1.exon3;Parent=Dca16870.1
scaffold1845	Augustus	exon	37055	37200	.	+	.	ID=Dca16870.1.exon4;Parent=Dca16870.1
scaffold1845	Augustus	exon	37278	37402	.	+	.	ID=Dca16870.1.exon5;Parent=Dca16870.1
scaffold1845	Augustus	exon	37490	37583	.	+	.	ID=Dca16870.1.exon6;Parent=Dca16870.1
scaffold1845	Augustus	exon	38076	38239	.	+	.	ID=Dca16870.1.exon7;Parent=Dca16870.1
scaffold1845	Augustus	exon	38724	38885	.	+	.	ID=Dca16870.1.exon8;Parent=Dca16870.1
scaffold1845	Augustus	exon	39483	39609	.	+	.	ID=Dca16870.1.exon9;Parent=Dca16870.1
scaffold1845	Augustus	exon	39726	39892	.	+	.	ID=Dca16870.1.exon10;Parent=Dca16870.1
scaffold1845	Augustus	exon	40020	40127	.	+	.	ID=Dca16870.1.exon11;Parent=Dca16870.1
scaffold1845	Augustus	exon	40415	40510	.	+	.	ID=Dca16870.1.exon12;Parent=Dca16870.1