Dca16889.1
Annotation
- 3-exons
- f-1
- sp|D3IVS1_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold18470)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16889.1 |
11 |
331 |
345 |
40 |
321 |
43 |
7e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVS1_9POAL |
30 |
300 |
566 |
47.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16889.1 |
202 |
330 |
345 |
17.39 |
129 |
47 |
7e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
585 |
714 |
1428 |
9.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18470 |
Augustus |
mRNA |
1194 |
2986 |
. |
- |
. |
ID=Dca16889.1;Parent=Dca16889 |
| scaffold18470 |
Augustus |
exon |
1194 |
1626 |
. |
- |
. |
ID=Dca16889.1.exon1;Parent=Dca16889.1 |
| scaffold18470 |
Augustus |
exon |
2281 |
2311 |
. |
- |
. |
ID=Dca16889.1.exon2;Parent=Dca16889.1 |
| scaffold18470 |
Augustus |
exon |
2413 |
2986 |
. |
- |
. |
ID=Dca16889.1.exon3;Parent=Dca16889.1 |
